Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii plp-dependent enzyme | CE139_RS14525 | Not Available | Positive | 3119650 - 3120858 | 43850.0 |
| dha2 family efflux mfs transporter permease subunit | CE139_RS14530 | Not Available | Positive | 3120855 - 3122261 | 48802.7 |
| iuca/iucc family protein | CE139_RS14535 | Not Available | Positive | 3122258 - 3124099 | 69432.7 |
| hpch/hpai aldolase family protein | CE139_RS14540 | Not Available | Positive | 3124093 - 3124869 | 27807.4 |
| iuca/iucc family protein | CE139_RS14545 | Not Available | Positive | 3124866 - 3126716 | 67794.0 |
| abc transporter substrate-binding protein | CE139_RS14550 | Not Available | Positive | 3126706 - 3127623 | 32684.7 |
| feccd family abc transporter permease | CE139_RS14555 | Not Available | Positive | 3127620 - 3128621 | 34068.2 |
| feccd family abc transporter permease | CE139_RS14560 | Not Available | Positive | 3128611 - 3129642 | 35236.6 |
| abc transporter atp-binding protein | CE139_RS14565 | Not Available | Positive | 3129653 - 3130450 | 29016.2 |
| iuca/iucc family c-terminal-domain containing protein | CE139_RS14570 | Not Available | Positive | 3130441 - 3131226 | 29239.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





