Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | CE139_RS14375 | Not Available | Positive | 3085634 - 3086794 | 41705.1 |
| acetylornithine deacetylase | CE139_RS14380 | Not Available | Positive | 3086791 - 3087942 | 40305.5 |
| 2-hydroxyacid dehydrogenase | CE139_RS14385 | Not Available | Negative | 3087961 - 3088887 | 33999.0 |
| cupin domain-containing protein | CE139_RS14390 | Not Available | Positive | 3089120 - 3089833 | 25708.9 |
| lrp/asnc family transcriptional regulator | CE139_RS14395 | Not Available | Negative | 3089886 - 3090377 | 18184.2 |
| hypothetical protein | CE139_RS14400 | Not Available | Negative | 3090407 - 3091096 | 25321.0 |
| 4-aminobutyrate--2-oxoglutarate transaminase | CE139_RS14405 | Not Available | Negative | 3091152 - 3092441 | 45127.6 |
| nad-dependent succinate-semialdehyde dehydrogenase | CE139_RS14410 | Not Available | Negative | 3092744 - 3094207 | 51861.2 |
| lysr family transcriptional regulator | CE139_RS14415 | Not Available | Negative | 3094352 - 3095260 | 33863.8 |
| alanine racemase | CE139_RS14420 | Not Available | Positive | 3095356 - 3096492 | 40433.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





