Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CE139_RS25770 | Not Available | Positive | 3062972 - 3063748 | 27127.5 |
| sensor domain-containing diguanylate cyclase | CE139_RS14280 | Not Available | Negative | 3063762 - 3064793 | 38303.8 |
| iclr family transcriptional regulator | CE139_RS14285 | Not Available | Negative | 3064968 - 3065741 | 26555.1 |
| homogentisate 1,2-dioxygenase | CE139_RS14290 | Not Available | Positive | 3065841 - 3067163 | 48328.4 |
| fumarylacetoacetase | CE139_RS14295 | Not Available | Positive | 3067160 - 3068458 | 46627.4 |
| maleylacetoacetate isomerase | CE139_RS14300 | Not Available | Positive | 3068583 - 3069221 | 23341.2 |
| 4-hydroxyphenylpyruvate dioxygenase | CE139_RS14305 | Not Available | Positive | 3069359 - 3070438 | 40108.9 |
| cdar family transcriptional regulator | CE139_RS14310 | Not Available | Positive | 3070533 - 3071627 | 39674.8 |
| glycerate kinase | CE139_RS14315 | Not Available | Positive | 3071709 - 3072845 | 38401.1 |
| hypothetical protein | CE139_RS14320 | Not Available | Positive | 3072922 - 3073326 | 14513.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





