Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CE139_RS01035 | Not Available | Positive | 235642 - 237270 | 58512.5 |
| hypothetical protein | CE139_RS25180 | Not Available | Positive | 237430 - 237552 | 4260.56 |
| methyl-accepting chemotaxis protein | CE139_RS01040 | Not Available | Negative | 237595 - 239220 | 58138.2 |
| carbonic anhydrase | CE139_RS01045 | Not Available | Positive | 239881 - 240588 | 25554.6 |
| sulp family inorganic anion transporter | CE139_RS01050 | Not Available | Positive | 240800 - 242359 | 54100.4 |
| hu family dna-binding protein | CE139_RS01055 | Not Available | Positive | 242773 - 243048 | 9903.09 |
| rubredoxin | CE139_RS01060 | Not Available | Negative | 243141 - 243308 | 6179.3 |
| mfs transporter | CE139_RS01065 | Not Available | Positive | 243482 - 244630 | 39660.1 |
| hipa domain-containing protein | CE139_RS01070 | Not Available | Positive | 245135 - 246055 | 34186.7 |
| helix-turn-helix domain-containing protein | CE139_RS01075 | Not Available | Positive | 246052 - 246327 | 10412.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





