Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | CE139_RS14230 | Not Available | Positive | 3053357 - 3054358 | 36747.1 |
| trap transporter small permease | CE139_RS14235 | Not Available | Positive | 3054415 - 3055056 | 23749.4 |
| c4-dicarboxylate trap transporter large permease protein dctm | CE139_RS14240 | Not Available | Positive | 3055053 - 3056336 | 45286.0 |
| n-methyl-l-tryptophan oxidase | CE139_RS14245 | Not Available | Positive | 3056636 - 3057805 | 42153.9 |
| ion channel | CE139_RS14250 | Not Available | Negative | 3057802 - 3058458 | 24182.1 |
| mfs transporter | CE139_RS14255 | Not Available | Negative | 3058548 - 3059708 | 41025.0 |
| marr family winged helix-turn-helix transcriptional regulator | CE139_RS14260 | Not Available | Positive | 3059959 - 3060411 | 16747.3 |
| hypothetical protein | CE139_RS14265 | Not Available | Positive | 3060462 - 3060728 | 9863.77 |
| mfs transporter | CE139_RS14270 | Not Available | Negative | 3060725 - 3061915 | 40958.6 |
| duf2857 domain-containing protein | CE139_RS25765 | Not Available | Positive | 3062078 - 3062893 | 30215.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





