Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybhn family protein | CE139_RS14135 | Not Available | Negative | 3026657 - 3027703 | 38952.5 |
| cardiolipin synthase clsb | CE139_RS14140 | Not Available | Negative | 3027700 - 3028947 | 47917.4 |
| endonuclease/exonuclease/phosphatase family protein | CE139_RS14145 | Not Available | Negative | 3028944 - 3029705 | 28619.4 |
| glycogen debranching protein glgx | CE139_RS14150 | Not Available | Negative | 3029702 - 3031891 | 82392.3 |
| duf2934 domain-containing protein | CE139_RS25160 | Not Available | Negative | 3032142 - 3032630 | 17118.1 |
| malto-oligosyltrehalose synthase | CE139_RS14160 | Not Available | Negative | 3032627 - 3035434 | 104492.0 |
| 4-alpha-glucanotransferase | CE139_RS14165 | Not Available | Negative | 3035431 - 3037497 | 75792.5 |
| malto-oligosyltrehalose trehalohydrolase | CE139_RS14170 | Not Available | Negative | 3037494 - 3039299 | 67265.6 |
| glycogen synthase glga | CE139_RS14175 | Not Available | Negative | 3039459 - 3041042 | 57426.9 |
| mechanosensitive ion channel family protein | CE139_RS14180 | Not Available | Negative | 3041389 - 3042510 | 41322.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





