Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase d | CE139_RS14090 | Not Available | Negative | 3011118 - 3013682 | 94716.6 |
| ku protein | CE139_RS14095 | Not Available | Negative | 3013694 - 3014569 | 32349.7 |
| xdhc family protein | CE139_RS14100 | Not Available | Positive | 3014712 - 3015701 | 36087.4 |
| duf2857 domain-containing protein | CE139_RS25340 | Not Available | Positive | 3015704 - 3016186 | 16741.4 |
| cina family protein | CE139_RS25345 | Not Available | Positive | 3016352 - 3016861 | 18190.5 |
| ammonia-dependent nad(+) synthetase | CE139_RS14110 | Not Available | Positive | 3016858 - 3017688 | 30640.3 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | CE139_RS14115 | Not Available | Positive | 3018148 - 3020151 | 75244.8 |
| maltose alpha-d-glucosyltransferase | CE139_RS14120 | Not Available | Positive | 3020289 - 3023618 | 124652.0 |
| 1,4-alpha-glucan branching protein glgb | CE139_RS14125 | Not Available | Positive | 3023615 - 3025834 | 83622.7 |
| polysaccharide lyase family 7 protein | CE139_RS14130 | Not Available | Positive | 3025924 - 3026649 | 26588.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





