Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrc | CE139_RS13940 | Not Available | Positive | 2987191 - 2989017 | 67873.3 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | CE139_RS13945 | Not Available | Positive | 2989049 - 2989609 | 20594.9 |
| Trna-gly | Not Available | Not Available | Positive | 2989670 - 2989745 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2989782 - 2989855 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2989963 - 2990049 | Not Available |
| hypothetical protein | CE139_RS13965 | Not Available | Negative | 2990092 - 2990352 | 9772.58 |
| tigr02450 family trp-rich protein | CE139_RS13970 | Not Available | Negative | 2990479 - 2990706 | 9046.82 |
| gamma-glutamylcyclotransferase | CE139_RS13975 | Not Available | Negative | 2990703 - 2991368 | 24858.8 |
| alkyl hydroperoxide reductase subunit f | CE139_RS13980 | Not Available | Negative | 2991582 - 2993141 | 55710.8 |
| alkyl hydroperoxide reductase subunit c | CE139_RS13985 | Not Available | Negative | 2993225 - 2993788 | 20812.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





