Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | CE139_RS00985 | Not Available | Positive | 226636 - 227625 | 36108.1 |
| hypothetical protein | CE139_RS00990 | Not Available | Positive | 227987 - 228214 | 8298.96 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | CE139_RS00995 | Not Available | Positive | 228343 - 229089 | 27884.0 |
| yihy/virulence factor brkb family protein | CE139_RS01000 | Not Available | Negative | 229446 - 230435 | 35991.1 |
| glycosyltransferase family 2 protein | CE139_RS01005 | Not Available | Negative | 230562 - 231404 | 30446.2 |
| hypothetical protein | CE139_RS01010 | Not Available | Negative | 231401 - 232438 | 36796.1 |
| glycosyltransferase | CE139_RS01015 | Not Available | Negative | 232446 - 233522 | 38806.5 |
| glutathione s-transferase family protein | CE139_RS01020 | Not Available | Positive | 233710 - 234441 | 27333.5 |
| csbd family protein | CE139_RS01025 | Not Available | Negative | 234492 - 234683 | 6590.75 |
| lactoylglutathione lyase | CE139_RS01030 | Not Available | Positive | 234920 - 235444 | 19661.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





