Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr domain-containing protein | CE139_RS13740 | Not Available | Positive | 2943950 - 2944903 | 34997.2 |
| tonb-dependent siderophore receptor | CE139_RS13745 | Not Available | Positive | 2945038 - 2947434 | 86692.9 |
| hypothetical protein | CE139_RS13750 | Not Available | Positive | 2948347 - 2948811 | 16720.5 |
| hypothetical protein | CE139_RS13755 | Not Available | Positive | 2948954 - 2950111 | 42479.5 |
| hypothetical protein | CE139_RS13760 | Not Available | Positive | 2950101 - 2950922 | 31321.2 |
| hypothetical protein | CE139_RS13765 | Not Available | Negative | 2951266 - 2951937 | 24725.3 |
| duf2857 domain-containing protein | CE139_RS13770 | Not Available | Negative | 2952203 - 2953094 | 29337.6 |
| hypothetical protein | CE139_RS13775 | Not Available | Negative | 2953112 - 2953348 | 8417.07 |
| nad-dependent succinate-semialdehyde dehydrogenase | CE139_RS13780 | Not Available | Positive | 2954164 - 2955534 | 47930.4 |
| cupin domain-containing protein | CE139_RS13785 | Not Available | Positive | 2955550 - 2955969 | 15091.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





