Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bax inhibitor-1/ycca family protein | CE139_RS13100 | Not Available | Negative | 2832449 - 2833117 | 24049.7 |
| Trna-ser | Not Available | Not Available | Positive | 2833245 - 2833332 | Not Available |
| methyl-accepting chemotaxis protein | CE139_RS25525 | Not Available | Negative | 2880540 - 2881853 | 48302.5 |
| methyl-accepting chemotaxis protein | CE139_RS13470 | Not Available | Negative | 2882315 - 2883421 | 39278.0 |
| duf2857 domain-containing protein | CE139_RS25740 | Not Available | Negative | 2883398 - 2883940 | 19699.9 |
| hypothetical protein | CE139_RS13475 | Not Available | Negative | 2884326 - 2884517 | 6727.99 |
| hypothetical protein | CE139_RS13480 | Not Available | Negative | 2884919 - 2885077 | 5873.01 |
| hypothetical protein | CE139_RS13485 | Not Available | Negative | 2885299 - 2885511 | 8189.72 |
| methyl-accepting chemotaxis protein | CE139_RS13495 | Not Available | Negative | 2886057 - 2887745 | 60674.1 |
| hypothetical protein | CE139_RS13500 | Not Available | Positive | 2887923 - 2888186 | 9895.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





