Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein chaperone lola | CE139_RS13050 | Not Available | Positive | 2824303 - 2824926 | 22837.3 |
| replication-associated recombination protein a | CE139_RS13055 | Not Available | Positive | 2824936 - 2826264 | 48959.2 |
| serine--trna ligase | CE139_RS13060 | Not Available | Positive | 2826312 - 2827589 | 47200.2 |
| siroheme synthase cysg | CE139_RS13065 | Not Available | Positive | 2827589 - 2828983 | 50145.5 |
| glutathione s-transferase family protein | CE139_RS13070 | Not Available | Negative | 2828986 - 2829987 | 38483.2 |
| glycosyl transferase family protein | CE139_RS13075 | Not Available | Negative | 2830053 - 2831036 | 35965.2 |
| tuse/dsrc/dsvc family sulfur relay protein | CE139_RS13080 | Not Available | Negative | 2831033 - 2831347 | 11568.1 |
| sulfurtransferase complex subunit tusb | CE139_RS13085 | Not Available | Negative | 2831350 - 2831649 | 10642.8 |
| sulfurtransferase complex subunit tusc | CE139_RS13090 | Not Available | Negative | 2831646 - 2832002 | 12231.9 |
| sulfurtransferase complex subunit tusd | CE139_RS13095 | Not Available | Negative | 2832004 - 2832399 | 14484.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





