Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimv/hubp family polar landmark protein | CE139_RS13000 | Not Available | Positive | 2811761 - 2813962 | 77145.2 |
| patatin-like phospholipase family protein | CE139_RS13005 | Not Available | Negative | 2813963 - 2816161 | 80864.0 |
| selt/selw/selh family protein | CE139_RS13010 | Not Available | Positive | 2816233 - 2816553 | 11609.8 |
| cold shock domain-containing protein cspd | CE139_RS13015 | Not Available | Negative | 2816556 - 2816831 | 9657.32 |
| atp-dependent clp protease adapter clps | CE139_RS13020 | Not Available | Positive | 2817053 - 2817409 | 13465.0 |
| atp-dependent clp protease atp-binding subunit clpa | CE139_RS13025 | Not Available | Positive | 2817458 - 2819728 | 83633.0 |
| translation initiation factor if-1 | CE139_RS13030 | Not Available | Negative | 2819800 - 2820018 | 8303.06 |
| arginyltransferase | CE139_RS13035 | Not Available | Negative | 2820113 - 2820820 | 27404.1 |
| leucyl/phenylalanyl-trna--protein transferase | CE139_RS13040 | Not Available | Negative | 2820856 - 2821545 | 25555.6 |
| dna translocase ftsk | CE139_RS13045 | Not Available | Positive | 2821802 - 2824285 | 89509.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





