Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | CE139_RS00935 | Not Available | Negative | 215720 - 216790 | 38614.0 |
| efflux rnd transporter periplasmic adaptor subunit | CE139_RS00940 | Not Available | Negative | 216787 - 217890 | 39425.0 |
| hypothetical protein | CE139_RS00945 | Not Available | Positive | 218198 - 218425 | 7626.1 |
| duf1127 domain-containing protein | CE139_RS00950 | Not Available | Negative | 218551 - 218760 | 8069.68 |
| gaba permease | CE139_RS00955 | Not Available | Negative | 219115 - 220503 | 49181.2 |
| gluconate 2-dehydrogenase subunit 3 family protein | CE139_RS00960 | Not Available | Positive | 221066 - 221797 | 26361.3 |
| gmc family oxidoreductase | CE139_RS00965 | Not Available | Positive | 221797 - 223584 | 65305.0 |
| cytochrome c | CE139_RS00970 | Not Available | Positive | 223596 - 224939 | 47888.6 |
| duf2268 domain-containing putative zn-dependent protease | CE139_RS00975 | Not Available | Positive | 224996 - 225616 | 22758.9 |
| lysr family transcriptional regulator | CE139_RS00980 | Not Available | Negative | 225619 - 226533 | 33440.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





