Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taud/tfda dioxygenase family protein | CE139_RS12855 | Not Available | Positive | 2779316 - 2780197 | 32902.2 |
| abc transporter atp-binding protein | CE139_RS12860 | Not Available | Positive | 2780356 - 2781237 | 32980.1 |
| abc transporter permease | CE139_RS12865 | Not Available | Positive | 2781253 - 2782119 | 31370.2 |
| llm class flavin-dependent oxidoreductase | CE139_RS12870 | Not Available | Positive | 2783169 - 2784257 | 39522.8 |
| abc transporter substrate-binding protein | CE139_RS12875 | Not Available | Positive | 2784328 - 2785275 | 34239.7 |
| llm class flavin-dependent oxidoreductase | CE139_RS12880 | Not Available | Positive | 2785272 - 2786597 | 48678.0 |
| acyl-coa dehydrogenase family protein | CE139_RS12885 | Not Available | Positive | 2786598 - 2787779 | 42669.6 |
| lysr family transcriptional regulator | CE139_RS12890 | Not Available | Positive | 2787901 - 2788794 | 32121.1 |
| aconitate hydratase acna | CE139_RS12895 | Not Available | Negative | 2788843 - 2791542 | 97860.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | CE139_RS12900 | Not Available | Positive | 2791756 - 2792817 | 39632.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





