Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS12805 | Not Available | Positive | 2769448 - 2769747 | 10845.2 |
| cobw family gtp-binding protein | CE139_RS12810 | Not Available | Positive | 2769744 - 2770733 | 35637.6 |
| potd/potf family extracellular solute-binding protein | CE139_RS12815 | Not Available | Positive | 2770730 - 2771914 | 44382.5 |
| dimethylsulfone monooxygenase sfng | CE139_RS12820 | Not Available | Positive | 2772141 - 2773232 | 40271.3 |
| class i sam-dependent methyltransferase | CE139_RS12825 | Not Available | Positive | 2773399 - 2774001 | 22371.0 |
| metq/nlpa family abc transporter substrate-binding protein | CE139_RS12830 | Not Available | Negative | 2774026 - 2774811 | 28340.9 |
| llm class flavin-dependent oxidoreductase | CE139_RS12835 | Not Available | Negative | 2774808 - 2776196 | 51322.8 |
| abc transporter substrate-binding protein | CE139_RS12840 | Not Available | Positive | 2776530 - 2777267 | 25509.3 |
| terc family protein | CE139_RS12845 | Not Available | Positive | 2777430 - 2778113 | 23767.2 |
| abc transporter substrate-binding protein | CE139_RS12850 | Not Available | Positive | 2778282 - 2779289 | 36252.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





