Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CE139_RS12755 | Not Available | Positive | 2759235 - 2760263 | 37226.3 |
| metq/nlpa family abc transporter substrate-binding protein | CE139_RS12760 | Not Available | Positive | 2760327 - 2761169 | 30480.2 |
| methionine abc transporter atp-binding protein | CE139_RS12765 | Not Available | Positive | 2761166 - 2762260 | 38932.6 |
| methionine abc transporter permease | CE139_RS12770 | Not Available | Positive | 2762253 - 2762906 | 22911.9 |
| gntr family transcriptional regulator | CE139_RS12775 | Not Available | Negative | 2762903 - 2763916 | 37001.8 |
| amidase | CE139_RS12780 | Not Available | Positive | 2764202 - 2765557 | 46947.4 |
| polysaccharide deacetylase family protein | CE139_RS12785 | Not Available | Positive | 2765631 - 2766512 | 33645.1 |
| mfs transporter | CE139_RS12790 | Not Available | Positive | 2766538 - 2767896 | 48299.3 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS12795 | Not Available | Positive | 2767908 - 2768678 | 26451.6 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS12800 | Not Available | Positive | 2768689 - 2769438 | 25696.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





