Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4880 domain-containing protein | CE139_RS12705 | Not Available | Positive | 2747506 - 2748438 | 33451.0 |
| tonb-dependent siderophore receptor | CE139_RS12710 | Not Available | Positive | 2748516 - 2750933 | 88411.1 |
| fumarate/nitrate reduction transcriptional regulator fnr | CE139_RS12715 | Not Available | Negative | 2750978 - 2751709 | 26914.4 |
| oxygen-independent coproporphyrinogen iii oxidase | CE139_RS12720 | Not Available | Negative | 2751773 - 2753155 | 52132.5 |
| alpha/beta family hydrolase | CE139_RS12725 | Not Available | Positive | 2753268 - 2753915 | 23245.0 |
| rhodanese-related sulfurtransferase | CE139_RS12730 | Not Available | Negative | 2753912 - 2755480 | 56144.6 |
| cysteine dioxygenase | CE139_RS12735 | Not Available | Negative | 2755477 - 2756079 | 22170.3 |
| class ii aldolase/adducin family protein | CE139_RS12740 | Not Available | Positive | 2756331 - 2757110 | 28209.6 |
| abc transporter substrate-binding protein | CE139_RS12745 | Not Available | Positive | 2757107 - 2758060 | 33367.0 |
| abc transporter substrate-binding protein | CE139_RS12750 | Not Available | Positive | 2758066 - 2759031 | 34192.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





