Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | CE139_RS12555 | Not Available | Positive | 2718323 - 2718964 | 23495.6 |
| atp-dependent clp protease atp-binding subunit clpx | CE139_RS12560 | Not Available | Positive | 2719074 - 2720354 | 46879.3 |
| endopeptidase la | CE139_RS12565 | Not Available | Positive | 2720481 - 2722877 | 88863.6 |
| sura n-terminal domain-containing protein | CE139_RS12570 | Not Available | Positive | 2723052 - 2724908 | 68286.0 |
| cysteine synthase a | CE139_RS12575 | Not Available | Negative | 2725012 - 2725986 | 34443.9 |
| aaa family atpase | CE139_RS12580 | Not Available | Positive | 2726097 - 2726930 | 31524.9 |
| vwa domain-containing protein | CE139_RS12585 | Not Available | Positive | 2726939 - 2728126 | 44780.2 |
| protease htpx | CE139_RS12590 | Not Available | Negative | 2728166 - 2729044 | 32172.5 |
| pyridoxal phosphate-dependent aminotransferase | CE139_RS12595 | Not Available | Negative | 2729238 - 2730449 | 44636.8 |
| peptide-methionine (r)-s-oxide reductase msrb | CE139_RS12600 | Not Available | Positive | 2730605 - 2731006 | 14959.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





