Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | CE139_RS12505 | Not Available | Negative | 2706227 - 2707378 | 41880.1 |
| enoyl-coa hydratase/isomerase family protein | CE139_RS12510 | Not Available | Negative | 2707390 - 2708442 | 38390.1 |
| 3-hydroxyisobutyrate dehydrogenase | CE139_RS12515 | Not Available | Negative | 2708439 - 2709335 | 30155.3 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | CE139_RS12520 | Not Available | Negative | 2709349 - 2710863 | 53547.6 |
| amp-binding protein | CE139_RS12525 | Not Available | Negative | 2710860 - 2712593 | 63211.1 |
| lysr family transcriptional regulator | CE139_RS12530 | Not Available | Positive | 2712802 - 2713758 | 35913.2 |
| hypothetical protein | CE139_RS12535 | Not Available | Positive | 2713857 - 2714303 | 17002.0 |
| 2-hydroxyacid dehydrogenase | CE139_RS12540 | Not Available | Negative | 2714329 - 2715279 | 33268.0 |
| nramp family divalent metal transporter | CE139_RS12545 | Not Available | Negative | 2715333 - 2716640 | 47138.0 |
| trigger factor | CE139_RS12550 | Not Available | Positive | 2716922 - 2718232 | 48591.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





