Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4870 domain-containing protein | CE139_RS00885 | Not Available | Positive | 201616 - 201978 | 13746.2 |
| hypothetical protein | CE139_RS00890 | Not Available | Positive | 202263 - 203555 | 46847.1 |
| galactarate dehydratase | CE139_RS00895 | Not Available | Negative | 203625 - 205181 | 55587.6 |
| mfs transporter | CE139_RS00900 | Not Available | Negative | 205203 - 206561 | 49167.6 |
| laci family dna-binding transcriptional regulator | CE139_RS00905 | Not Available | Negative | 206728 - 207765 | 36417.8 |
| low specificity l-threonine aldolase | CE139_RS00910 | Not Available | Negative | 208252 - 209292 | 37574.4 |
| aminopeptidase p family protein | CE139_RS00915 | Not Available | Negative | 209289 - 211100 | 64983.5 |
| hypothetical protein | CE139_RS00920 | Not Available | Negative | 211221 - 211391 | 6057.14 |
| lysr family transcriptional regulator | CE139_RS00925 | Not Available | Negative | 211510 - 212451 | 35383.7 |
| efflux rnd transporter permease subunit | CE139_RS00930 | Not Available | Negative | 212670 - 215723 | 112452.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





