Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | CE139_RS12405 | Not Available | Positive | 2685866 - 2687110 | 45391.2 |
| sdr family oxidoreductase | CE139_RS12410 | Not Available | Positive | 2687121 - 2687798 | 23406.5 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS12415 | Not Available | Positive | 2687897 - 2688664 | 26069.7 |
| acetyl-coa c-acyltransferase | CE139_RS12420 | Not Available | Positive | 2688844 - 2690028 | 40614.9 |
| enoyl-coa hydratase | CE139_RS12425 | Not Available | Positive | 2690043 - 2690828 | 28153.1 |
| lysr substrate-binding domain-containing protein | CE139_RS12430 | Not Available | Positive | 2690894 - 2691796 | 33347.5 |
| mfs transporter | CE139_RS12435 | Not Available | Positive | 2691980 - 2693287 | 46085.6 |
| metal-dependent hydrolase family protein | CE139_RS12440 | Not Available | Positive | 2693284 - 2694537 | 44243.5 |
| ester cyclase | CE139_RS12445 | Not Available | Positive | 2694599 - 2695000 | 14668.4 |
| arac family transcriptional regulator | CE139_RS12450 | Not Available | Negative | 2694997 - 2696016 | 37566.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





