Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin-like phospholipase family protein | CE139_RS12320 | Not Available | Positive | 2669693 - 2670829 | 40120.7 |
| vacj family lipoprotein | CE139_RS12325 | Not Available | Negative | 2670835 - 2671551 | 26924.0 |
| alpha/beta fold hydrolase | CE139_RS12330 | Not Available | Negative | 2671649 - 2672959 | 49308.6 |
| glycine betaine abc transporter substrate-binding protein | CE139_RS12335 | Not Available | Positive | 2673229 - 2674074 | 30360.9 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | CE139_RS12340 | Not Available | Negative | 2674117 - 2674971 | 30571.8 |
| Trna-arg | Not Available | Not Available | Positive | 2675219 - 2675295 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 2675331 - 2675406 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2675458 - 2675542 | Not Available |
| hypothetical protein | CE139_RS12360 | Not Available | Negative | 2675638 - 2675823 | 6584.99 |
| hypothetical protein | CE139_RS25285 | Not Available | Negative | 2676002 - 2676130 | 4278.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





