Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | CE139_RS12270 | Not Available | Negative | 2661101 - 2661898 | 29084.6 |
| abc transporter substrate-binding protein | CE139_RS12275 | Not Available | Negative | 2661903 - 2662964 | 38391.2 |
| utra domain-containing protein | CE139_RS12280 | Not Available | Positive | 2663147 - 2663884 | 27926.8 |
| m18 family aminopeptidase | CE139_RS12285 | Not Available | Negative | 2663892 - 2665181 | 46824.8 |
| class i sam-dependent methyltransferase | CE139_RS12290 | Not Available | Negative | 2665270 - 2665854 | 21632.6 |
| rlua family pseudouridine synthase | CE139_RS12295 | Not Available | Negative | 2665900 - 2666535 | 23928.6 |
| cell division topological specificity factor mine | CE139_RS12300 | Not Available | Negative | 2666655 - 2666909 | 9960.95 |
| septum site-determining protein mind | CE139_RS12305 | Not Available | Negative | 2666906 - 2667724 | 29696.8 |
| septum site-determining protein minc | CE139_RS12310 | Not Available | Negative | 2667859 - 2668605 | 26549.1 |
| lipid a biosynthesis lauroyl acyltransferase | CE139_RS12315 | Not Available | Positive | 2668757 - 2669692 | 36151.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





