Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1206 domain-containing protein | CE139_RS12170 | Not Available | Negative | 2641575 - 2642408 | 29522.6 |
| grea/greb family elongation factor | CE139_RS12175 | Not Available | Positive | 2642550 - 2643023 | 17056.5 |
| hypothetical protein | CE139_RS12180 | Not Available | Negative | 2643452 - 2643739 | 10316.2 |
| terc family protein | CE139_RS12185 | Not Available | Negative | 2643754 - 2644779 | 37954.5 |
| sgcj/ecac family oxidoreductase | CE139_RS12190 | Not Available | Negative | 2644923 - 2645354 | 15792.7 |
| duf6482 family protein | CE139_RS12195 | Not Available | Negative | 2645518 - 2645829 | 11315.5 |
| lipocalin-like domain-containing protein | CE139_RS12200 | Not Available | Negative | 2645955 - 2647007 | 38202.8 |
| ftsx-like permease family protein | CE139_RS12205 | Not Available | Negative | 2646997 - 2649456 | 87801.3 |
| abc transporter atp-binding protein | CE139_RS12210 | Not Available | Negative | 2649453 - 2650127 | 23781.7 |
| hypothetical protein | CE139_RS12215 | Not Available | Negative | 2650191 - 2650481 | 10832.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





