Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CE139_RS12120 | Not Available | Positive | 2628657 - 2630312 | 58344.5 |
| chemotaxis protein chew | CE139_RS12125 | Not Available | Positive | 2630312 - 2630782 | 16593.5 |
| cher family methyltransferase | CE139_RS12130 | Not Available | Positive | 2630793 - 2631596 | 30629.9 |
| chemotaxis protein ched | CE139_RS12135 | Not Available | Positive | 2631599 - 2632108 | 18597.7 |
| chemotaxis response regulator protein-glutamate methylesterase | CE139_RS12140 | Not Available | Positive | 2632105 - 2633175 | 37609.2 |
| duf1349 domain-containing protein | CE139_RS12145 | Not Available | Positive | 2633229 - 2633804 | 21439.4 |
| maoc family dehydratase | CE139_RS12150 | Not Available | Negative | 2633821 - 2634291 | 16846.6 |
| long-chain fatty acid--coa ligase | CE139_RS12155 | Not Available | Positive | 2634551 - 2636230 | 62170.7 |
| sgnh/gdsl hydrolase family protein | CE139_RS12160 | Not Available | Positive | 2636383 - 2637162 | 28577.3 |
| atp-dependent rna helicase hrpa | CE139_RS12165 | Not Available | Positive | 2637306 - 2641331 | 151078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





