Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2857 domain-containing protein | CE139_RS25685 | Not Available | Positive | 2607784 - 2608470 | 26257.3 |
| duf2857 domain-containing protein | CE139_RS25690 | Not Available | Positive | 2608621 - 2609010 | 13518.0 |
| acyl-coa dehydrogenase family protein | CE139_RS12040 | Not Available | Negative | 2609068 - 2610312 | 44466.9 |
| ribonuclease z | CE139_RS12045 | Not Available | Positive | 2610498 - 2611502 | 36154.0 |
| ynce family protein | CE139_RS12050 | Not Available | Positive | 2611605 - 2612726 | 40258.5 |
| mekhla domain-containing protein | CE139_RS12055 | Not Available | Positive | 2612835 - 2613305 | 17316.5 |
| lactate utilization protein c | CE139_RS12060 | Not Available | Negative | 2613474 - 2614142 | 24667.4 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | CE139_RS12065 | Not Available | Negative | 2614139 - 2615584 | 53496.5 |
| (fe-s)-binding protein | CE139_RS12070 | Not Available | Negative | 2615590 - 2616414 | 30080.9 |
| lactate permease lctp family transporter | CE139_RS12075 | Not Available | Negative | 2616486 - 2618180 | 58893.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





