Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | CE139_RS11985 | Not Available | Negative | 2596922 - 2597806 | 32724.4 |
| sigma-54-dependent transcriptional regulator | CE139_RS11990 | Not Available | Negative | 2598080 - 2598886 | 29108.0 |
| hypothetical protein | CE139_RS11995 | Not Available | Positive | 2599132 - 2599524 | 14341.6 |
| exodeoxyribonuclease iii | CE139_RS12000 | Not Available | Negative | 2599527 - 2600315 | 30068.6 |
| glycoside hydrolase family 5 protein | CE139_RS12005 | Not Available | Positive | 2600758 - 2603457 | 95336.0 |
| hypothetical protein | CE139_RS12010 | Not Available | Positive | 2603683 - 2603877 | 7730.28 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CE139_RS12015 | Not Available | Negative | 2603891 - 2604232 | 12353.9 |
| pirin family protein | CE139_RS12020 | Not Available | Negative | 2604288 - 2605148 | 30781.6 |
| sigma-54 interaction domain-containing protein | CE139_RS12025 | Not Available | Negative | 2605226 - 2606311 | 40237.8 |
| acyl-coa dehydrogenase family protein | CE139_RS12030 | Not Available | Negative | 2606322 - 2607488 | 42639.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





