Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase family protein | CE139_RS11885 | Not Available | Negative | 2579298 - 2580449 | 42340.0 |
| iron-sulfur cluster carrier protein apbc | CE139_RS11890 | Not Available | Positive | 2580572 - 2581666 | 38250.2 |
| dctp deaminase | CE139_RS11895 | Not Available | Positive | 2581747 - 2582313 | 21216.3 |
| chemotaxis protein chev | CE139_RS11900 | Not Available | Positive | 2582430 - 2583359 | 34604.3 |
| mosc domain-containing protein | CE139_RS11905 | Not Available | Positive | 2583431 - 2584234 | 29564.7 |
| ld-carboxypeptidase | CE139_RS11910 | Not Available | Positive | 2584231 - 2585127 | 32202.5 |
| pyruvate kinase | CE139_RS11915 | Not Available | Negative | 2585143 - 2586996 | 66778.6 |
| quinolinate synthase nada | CE139_RS11920 | Not Available | Positive | 2587210 - 2588268 | 38561.6 |
| m48 family metalloprotease | CE139_RS11925 | Not Available | Negative | 2588285 - 2589724 | 52985.6 |
| sulfurtransferase tusa family protein | CE139_RS11930 | Not Available | Positive | 2589821 - 2590075 | 8984.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





