Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba family protein | CE139_RS11690 | Not Available | Negative | 2545495 - 2546133 | 23539.0 |
| bestrophin family protein | CE139_RS11695 | Not Available | Positive | 2546417 - 2547355 | 35748.4 |
| sdr family oxidoreductase | CE139_RS11700 | Not Available | Negative | 2547399 - 2548550 | 42192.9 |
| duf2789 domain-containing protein | CE139_RS11705 | Not Available | Positive | 2548690 - 2548929 | 8770.18 |
| hypothetical protein | CE139_RS25280 | Not Available | Positive | 2548987 - 2549118 | 4708.08 |
| dctp family trap transporter solute-binding subunit | CE139_RS11710 | Not Available | Positive | 2549306 - 2550295 | 36266.5 |
| beta-ketoacyl-acp synthase iii | CE139_RS11715 | Not Available | Positive | 2550368 - 2551489 | 39971.5 |
| parb/srx family n-terminal domain-containing protein | CE139_RS11720 | Not Available | Positive | 2551560 - 2552438 | 32538.1 |
| Trna-ala | Not Available | Not Available | Positive | 2552538 - 2552613 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2552655 - 2552730 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





