Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeac family protein | CE139_RS11640 | Not Available | Positive | 2534371 - 2534634 | 9765.72 |
| duf2797 domain-containing protein | CE139_RS11645 | Not Available | Positive | 2534906 - 2535748 | 31109.7 |
| aminopeptidase n | CE139_RS11650 | Not Available | Positive | 2535760 - 2538399 | 98227.1 |
| hypothetical protein | CE139_RS11655 | Not Available | Positive | 2538717 - 2539325 | 22409.4 |
| lema family protein | CE139_RS11660 | Not Available | Positive | 2539449 - 2540036 | 21677.1 |
| m48 family metalloprotease | CE139_RS11665 | Not Available | Positive | 2540041 - 2541900 | 66743.6 |
| response regulator | CE139_RS11670 | Not Available | Positive | 2541969 - 2542871 | 32165.9 |
| hypothetical protein | CE139_RS11675 | Not Available | Positive | 2542875 - 2543720 | 31898.7 |
| serine hydrolase domain-containing protein | CE139_RS11680 | Not Available | Negative | 2543708 - 2544898 | 42070.5 |
| peptide deformylase | CE139_RS11685 | Not Available | Positive | 2544959 - 2545498 | 20130.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





