Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 interaction domain-containing protein | CE139_RS11490 | Not Available | Negative | 2504212 - 2505654 | 52269.2 |
| 3-hydroxyacyl-coa dehydrogenase family protein | CE139_RS11495 | Not Available | Negative | 2505651 - 2506568 | 33349.3 |
| cytosine permease | CE139_RS11500 | Not Available | Positive | 2506767 - 2508029 | 43985.6 |
| cytosine deaminase | CE139_RS11505 | Not Available | Positive | 2508040 - 2509281 | 45779.9 |
| gnat family n-acetyltransferase | CE139_RS11510 | Not Available | Negative | 2510256 - 2510741 | 18012.2 |
| atp-binding protein | CE139_RS11515 | Not Available | Negative | 2510777 - 2512879 | 76515.5 |
| atpase domain-containing protein | CE139_RS11520 | Not Available | Negative | 2512876 - 2514369 | 54908.1 |
| histidine kinase famiy protein | CE139_RS11525 | Not Available | Negative | 2514605 - 2516218 | 60106.4 |
| response regulator | CE139_RS11530 | Not Available | Positive | 2516451 - 2516837 | 14063.1 |
| hypothetical protein | CE139_RS11535 | Not Available | Positive | 2517054 - 2517542 | 18033.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





