Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wecb/taga/cpsf family glycosyltransferase | CE139_RS00785 | Not Available | Positive | 175490 - 176230 | 27956.0 |
| hypothetical protein | CE139_RS00790 | Not Available | Positive | 176315 - 177592 | 48101.6 |
| flippase | CE139_RS00795 | Not Available | Positive | 177648 - 178919 | 46369.8 |
| glycoside hydrolase family 5 protein | CE139_RS00800 | Not Available | Positive | 178977 - 180011 | 38521.9 |
| polysaccharide biosynthesis/export family protein | CE139_RS00805 | Not Available | Positive | 180297 - 181409 | 39786.5 |
| bifunctional glycoside hydrolase 114/ polysaccharide deacetylase family protein | CE139_RS00810 | Not Available | Positive | 181740 - 184496 | 101357.0 |
| tetratricopeptide repeat protein | CE139_RS00815 | Not Available | Positive | 184477 - 188073 | 134090.0 |
| penicillin-binding protein activator lpob | CE139_RS00820 | Not Available | Positive | 188096 - 188611 | 18390.7 |
| peld ggdef domain-containing protein | CE139_RS00825 | Not Available | Positive | 188611 - 189984 | 51306.2 |
| heat repeat domain-containing protein | CE139_RS00830 | Not Available | Positive | 189962 - 190951 | 36356.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





