Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | CE139_RS11340 | Not Available | Negative | 2472518 - 2473240 | 26243.6 |
| marr family winged helix-turn-helix transcriptional regulator | CE139_RS11345 | Not Available | Negative | 2474055 - 2474519 | 17020.6 |
| sigma-54-dependent fis family transcriptional regulator | CE139_RS11350 | Not Available | Negative | 2474574 - 2476298 | 63016.4 |
| benzaldehyde dehydrogenase | CE139_RS11355 | Not Available | Positive | 2476524 - 2477996 | 51568.2 |
| coniferyl-alcohol dehydrogenase | CE139_RS11360 | Not Available | Positive | 2478036 - 2478803 | 27570.1 |
| transporter | CE139_RS11365 | Not Available | Positive | 2478884 - 2479828 | 35026.8 |
| duf4124 domain-containing protein | CE139_RS11370 | Not Available | Negative | 2479831 - 2480316 | 17248.3 |
| translesion dna synthesis-associated protein imua | CE139_RS11375 | Not Available | Positive | 2480753 - 2481367 | 21663.2 |
| y-family dna polymerase | CE139_RS11380 | Not Available | Positive | 2481375 - 2482784 | 53293.5 |
| error-prone dna polymerase | CE139_RS11385 | Not Available | Positive | 2482781 - 2485855 | 113568.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





