Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | CE139_RS11290 | Not Available | Negative | 2461697 - 2462737 | 37831.3 |
| abc transporter permease | CE139_RS11295 | Not Available | Negative | 2462783 - 2463661 | 31593.7 |
| abc transporter atp-binding protein | CE139_RS11300 | Not Available | Negative | 2463654 - 2464478 | 30343.7 |
| abc transporter substrate-binding protein | CE139_RS11305 | Not Available | Negative | 2464480 - 2465523 | 37156.9 |
| smp-30/gluconolactonase/lre family protein | CE139_RS11310 | Not Available | Positive | 2465724 - 2466644 | 33304.6 |
| mfs transporter | CE139_RS11315 | Not Available | Positive | 2466700 - 2468055 | 48489.1 |
| rraa family protein | CE139_RS11320 | Not Available | Negative | 2468278 - 2468952 | 23805.8 |
| hydroxyacid dehydrogenase | CE139_RS11325 | Not Available | Positive | 2469165 - 2470142 | 34962.4 |
| mfs transporter | CE139_RS11330 | Not Available | Positive | 2470221 - 2471552 | 47612.2 |
| amidohydrolase family protein | CE139_RS11335 | Not Available | Positive | 2471605 - 2472537 | 33794.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





