Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqjd family protein | CE139_RS11190 | Not Available | Negative | 2437310 - 2437705 | 14460.0 |
| duf3509 domain-containing protein | CE139_RS11195 | Not Available | Positive | 2438056 - 2438343 | 10340.4 |
| hypothetical protein | CE139_RS11200 | Not Available | Negative | 2438487 - 2438921 | 15726.2 |
| duf3509 domain-containing protein | CE139_RS11205 | Not Available | Negative | 2438937 - 2439218 | 10151.2 |
| dtdp-4-dehydrorhamnose reductase | CE139_RS11210 | Not Available | Negative | 2439316 - 2440194 | 32455.2 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | CE139_RS11215 | Not Available | Negative | 2440762 - 2444232 | 126453.0 |
| gnat family n-acetyltransferase | CE139_RS11220 | Not Available | Positive | 2444390 - 2444956 | 21417.7 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CE139_RS11225 | Not Available | Positive | 2445142 - 2447598 | 89893.1 |
| bile acid:sodium symporter family protein | CE139_RS11230 | Not Available | Negative | 2447548 - 2448489 | 32972.7 |
| recombination-associated protein rdgc | CE139_RS11235 | Not Available | Negative | 2448550 - 2449470 | 33931.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





