Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase ding | CE139_RS10990 | Not Available | Positive | 2397693 - 2399837 | 79048.7 |
| serine hydrolase domain-containing protein | CE139_RS10995 | Not Available | Positive | 2400010 - 2401155 | 40533.0 |
| nyn domain-containing protein | CE139_RS11000 | Not Available | Negative | 2401165 - 2401758 | 21596.6 |
| hypothetical protein | CE139_RS11005 | Not Available | Negative | 2401983 - 2402402 | 15580.4 |
| ompa family protein | CE139_RS11010 | Not Available | Positive | 2402682 - 2403527 | 29292.0 |
| pyridoxamine 5'-phosphate oxidase | CE139_RS11015 | Not Available | Positive | 2403608 - 2404255 | 24773.9 |
| hypothetical protein | CE139_RS11020 | Not Available | Positive | 2404389 - 2404853 | 15366.4 |
| aspartate aminotransferase family protein | CE139_RS11025 | Not Available | Positive | 2405040 - 2406260 | 43139.4 |
| arginine/ornithine succinyltransferase subunit alpha | CE139_RS11030 | Not Available | Positive | 2406323 - 2407342 | 37230.0 |
| arginine n-succinyltransferase | CE139_RS11035 | Not Available | Positive | 2407369 - 2408376 | 37128.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





