Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | CE139_RS00735 | Not Available | Positive | 164319 - 165407 | 40439.5 |
| hypothetical protein | CE139_RS00740 | Not Available | Positive | 165466 - 165762 | 10363.0 |
| glycosyltransferase family 4 protein | CE139_RS00745 | Not Available | Positive | 165808 - 167007 | 44599.7 |
| oxaloacetate decarboxylase | CE139_RS00750 | Not Available | Negative | 167011 - 167874 | 31156.4 |
| methyltransferase | CE139_RS00755 | Not Available | Positive | 168154 - 169362 | 45459.7 |
| hypothetical protein | CE139_RS00760 | Not Available | Positive | 169501 - 169713 | 7965.54 |
| undecaprenyl-phosphate glucose phosphotransferase | CE139_RS00765 | Not Available | Positive | 170184 - 171593 | 53017.8 |
| low molecular weight protein-tyrosine-phosphatase | CE139_RS00770 | Not Available | Positive | 171748 - 172188 | 16405.0 |
| polysaccharide biosynthesis tyrosine autokinase | CE139_RS00775 | Not Available | Positive | 172204 - 174420 | 81121.9 |
| glycosyltransferase family 2 protein | CE139_RS00780 | Not Available | Positive | 174622 - 175497 | 32239.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





