Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | CE139_RS10940 | Not Available | Negative | 2390103 - 2391005 | 34164.5 |
| gnat family n-acetyltransferase/peptidase c39 family protein | CE139_RS10945 | Not Available | Negative | 2391146 - 2392309 | 44031.7 |
| rimk family protein | CE139_RS10950 | Not Available | Positive | 2392449 - 2393942 | 56338.3 |
| sec-c metal-binding domain-containing protein | CE139_RS10955 | Not Available | Negative | 2394009 - 2394212 | 7492.59 |
| lea type 2 family protein | CE139_RS10960 | Not Available | Negative | 2394214 - 2394696 | 18206.0 |
| hypothetical protein | CE139_RS10965 | Not Available | Positive | 2394866 - 2395426 | 19353.9 |
| ychj family protein | CE139_RS10970 | Not Available | Negative | 2395439 - 2395912 | 17263.5 |
| duf6231 family protein | CE139_RS10975 | Not Available | Negative | 2395914 - 2396411 | 18712.3 |
| ompa family protein | CE139_RS10980 | Not Available | Positive | 2396547 - 2397206 | 22331.5 |
| duf1145 domain-containing protein | CE139_RS10985 | Not Available | Positive | 2397297 - 2397557 | 9494.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





