Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba family protein | CE139_RS10890 | Not Available | Negative | 2374607 - 2375146 | 19628.3 |
| sdr family oxidoreductase | CE139_RS10895 | Not Available | Negative | 2375232 - 2376275 | 37453.7 |
| coa transferase | CE139_RS10900 | Not Available | Positive | 2376438 - 2377835 | 49896.5 |
| response regulator | CE139_RS10905 | Not Available | Negative | 2377841 - 2378512 | 24851.1 |
| atp-binding protein | CE139_RS10910 | Not Available | Negative | 2378509 - 2379909 | 51613.3 |
| efflux transporter outer membrane subunit | CE139_RS10915 | Not Available | Negative | 2380131 - 2381567 | 51562.5 |
| efflux rnd transporter permease subunit | CE139_RS10920 | Not Available | Negative | 2381579 - 2384680 | 110046.0 |
| efflux rnd transporter permease subunit | CE139_RS10925 | Not Available | Negative | 2384677 - 2387829 | 112328.0 |
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | CE139_RS10930 | Not Available | Negative | 2387826 - 2389010 | 41202.3 |
| glutathione-dependent disulfide-bond oxidoreductase | CE139_RS10935 | Not Available | Negative | 2389157 - 2389990 | 30903.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





