Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CE139_RS10840 | Not Available | Negative | 2365074 - 2366399 | 48179.2 |
| phosphoglycerate dehydrogenase | CE139_RS10845 | Not Available | Negative | 2366427 - 2367377 | 33469.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | CE139_RS10850 | Not Available | Negative | 2367389 - 2368402 | 35940.4 |
| four-carbon acid sugar kinase family protein | CE139_RS10855 | Not Available | Negative | 2368395 - 2369648 | 43182.9 |
| iron-containing alcohol dehydrogenase | CE139_RS10860 | Not Available | Negative | 2369645 - 2370811 | 41316.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CE139_RS10865 | Not Available | Negative | 2370824 - 2371699 | 30835.3 |
| glcg/hbps family heme-binding protein | CE139_RS10870 | Not Available | Positive | 2372062 - 2372538 | 16073.3 |
| hydroxyisourate hydrolase | CE139_RS10875 | Not Available | Positive | 2372550 - 2372948 | 14709.5 |
| lipopolysaccharide biosynthesis protein | CE139_RS10880 | Not Available | Positive | 2373254 - 2374036 | 28939.9 |
| yqaa family protein | CE139_RS10885 | Not Available | Negative | 2374057 - 2374494 | 16247.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





