Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CE139_RS10790 | Not Available | Positive | 2355713 - 2356060 | 12661.3 |
| hypothetical protein | CE139_RS10795 | Not Available | Negative | 2356391 - 2356726 | 12256.6 |
| sdr family oxidoreductase | CE139_RS10800 | Not Available | Positive | 2356988 - 2357401 | 14542.0 |
| helix-turn-helix transcriptional regulator | CE139_RS10805 | Not Available | Negative | 2357490 - 2358272 | 29792.7 |
| carbon-nitrogen hydrolase family protein | CE139_RS10810 | Not Available | Positive | 2358412 - 2359227 | 28984.6 |
| apc family permease | CE139_RS10815 | Not Available | Positive | 2359335 - 2360663 | 47273.1 |
| deor/glpr family dna-binding transcription regulator | CE139_RS10820 | Not Available | Negative | 2360954 - 2361715 | 27426.0 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS10825 | Not Available | Negative | 2361771 - 2362454 | 23360.4 |
| sialidase family protein | CE139_RS10830 | Not Available | Negative | 2362466 - 2363596 | 41247.1 |
| sodium:solute symporter family protein | CE139_RS10835 | Not Available | Negative | 2363583 - 2364995 | 50493.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





