Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CE139_RS10740 | Not Available | Positive | 2345773 - 2346846 | 39304.9 |
| abc transporter permease | CE139_RS10745 | Not Available | Positive | 2346833 - 2347705 | 31221.5 |
| abc transporter permease | CE139_RS10750 | Not Available | Positive | 2347711 - 2348508 | 28630.8 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS10755 | Not Available | Positive | 2348505 - 2349644 | 40671.5 |
| (2fe-2s)-binding protein | CE139_RS10760 | Not Available | Positive | 2349634 - 2349981 | 12333.0 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS10765 | Not Available | Positive | 2349978 - 2351357 | 49007.4 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS10770 | Not Available | Positive | 2351371 - 2352537 | 41587.8 |
| rida family protein | CE139_RS10775 | Not Available | Positive | 2352498 - 2352857 | 12997.5 |
| sty4528 family pathogenicity island replication protein | CE139_RS10780 | Not Available | Positive | 2353970 - 2355082 | 41236.0 |
| hypothetical protein | CE139_RS10785 | Not Available | Negative | 2355118 - 2355393 | 10198.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





