Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l35 | CE139_RS10690 | Not Available | Positive | 2337494 - 2337688 | 7374.42 |
| 50s ribosomal protein l20 | CE139_RS10695 | Not Available | Positive | 2337719 - 2338075 | 13292.7 |
| phenylalanine--trna ligase subunit alpha | CE139_RS10700 | Not Available | Positive | 2338172 - 2339173 | 37624.9 |
| phenylalanine--trna ligase subunit beta | CE139_RS10705 | Not Available | Positive | 2339192 - 2341570 | 86547.7 |
| integration host factor subunit alpha | CE139_RS10710 | Not Available | Positive | 2341574 - 2341876 | 11432.8 |
| merr family transcriptional regulator | CE139_RS10715 | Not Available | Positive | 2341857 - 2342216 | 14166.1 |
| Trna-pro | Not Available | Not Available | Positive | 2342280 - 2342356 | Not Available |
| hypothetical protein | CE139_RS10725 | Not Available | Negative | 2342772 - 2343023 | 8943.65 |
| lysr substrate-binding domain-containing protein | CE139_RS10730 | Not Available | Negative | 2343353 - 2344246 | 32601.6 |
| abc transporter substrate-binding protein | CE139_RS10735 | Not Available | Positive | 2344470 - 2345540 | 38891.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





