Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyric acid synthase | CE139_RS10540 | Not Available | Positive | 2307215 - 2308666 | 51711.2 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | CE139_RS10545 | Not Available | Positive | 2308667 - 2309188 | 18512.7 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | CE139_RS10550 | Not Available | Positive | 2309185 - 2310243 | 36239.8 |
| histidine phosphatase family protein | CE139_RS10555 | Not Available | Positive | 2310236 - 2310787 | 20253.2 |
| adenosylcobinamide-gdp ribazoletransferase | CE139_RS10560 | Not Available | Positive | 2310787 - 2311518 | 25381.3 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CE139_RS10565 | Not Available | Positive | 2311678 - 2313831 | 79709.3 |
| ompp1/fadl family transporter | CE139_RS10570 | Not Available | Negative | 2313935 - 2315239 | 46720.6 |
| ribonuclease d | CE139_RS10575 | Not Available | Positive | 2315524 - 2316678 | 43500.3 |
| ycgl domain-containing protein | CE139_RS10580 | Not Available | Positive | 2316675 - 2316977 | 11570.3 |
| d-2-hydroxyacid dehydrogenase | CE139_RS10585 | Not Available | Positive | 2316974 - 2317915 | 33799.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





