Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerc | CE139_RS00685 | Not Available | Positive | 151513 - 152406 | 33141.0 |
| had family hydrolase | CE139_RS00690 | Not Available | Positive | 152403 - 153116 | 26010.9 |
| pyridine nucleotide-disulfide oxidoreductase | CE139_RS00695 | Not Available | Positive | 154072 - 155451 | 49225.0 |
| degt/dnrj/eryc1/strs family aminotransferase | CE139_RS00700 | Not Available | Positive | 155496 - 156668 | 43562.2 |
| lipopolysaccharide biosynthesis protein | CE139_RS00705 | Not Available | Positive | 156688 - 158223 | 56958.0 |
| glycosyltransferase family 2 protein | CE139_RS00710 | Not Available | Positive | 158225 - 159160 | 36162.2 |
| polysaccharide biosynthesis tyrosine autokinase | CE139_RS00715 | Not Available | Positive | 159218 - 161431 | 81583.5 |
| transcription/translation regulatory transformer protein rfah | CE139_RS00720 | Not Available | Positive | 161479 - 162009 | 19802.4 |
| glycosyltransferase | CE139_RS00725 | Not Available | Positive | 162045 - 163043 | 37621.8 |
| glycosyltransferase family 4 protein | CE139_RS00730 | Not Available | Positive | 163040 - 164287 | 45871.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





