Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sprt family zinc-dependent metalloprotease | CE139_RS10440 | Not Available | Negative | 2290227 - 2290799 | 22479.1 |
| dna-j related domain-containing protein | CE139_RS10445 | Not Available | Negative | 2290747 - 2291367 | 23448.0 |
| trna 2-thiocytidine(32) synthetase ttca | CE139_RS10450 | Not Available | Positive | 2291465 - 2292289 | 31286.2 |
| dna-3-methyladenine glycosylase i | CE139_RS10455 | Not Available | Positive | 2292289 - 2292960 | 25364.8 |
| sir2 family nad-dependent protein deacylase | CE139_RS10460 | Not Available | Positive | 2292957 - 2293721 | 26914.5 |
| c40 family peptidase | CE139_RS10465 | Not Available | Positive | 2293818 - 2294456 | 22996.2 |
| c40 family peptidase | CE139_RS10470 | Not Available | Positive | 2294553 - 2295086 | 18590.4 |
| hypothetical protein | CE139_RS10475 | Not Available | Positive | 2295141 - 2295461 | 12448.2 |
| c-type cytochrome | CE139_RS10480 | Not Available | Positive | 2295740 - 2296966 | 43875.6 |
| (2fe-2s)-binding protein | CE139_RS10485 | Not Available | Positive | 2296969 - 2297451 | 16994.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





