Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase iron-sulfur subunit | CE139_RS10390 | Not Available | Positive | 2276641 - 2277345 | 26012.5 |
| 2-oxoglutarate dehydrogenase e1 component | CE139_RS10395 | Not Available | Positive | 2277531 - 2280362 | 106063.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | CE139_RS10400 | Not Available | Positive | 2280405 - 2281622 | 42617.6 |
| dihydrolipoyl dehydrogenase | CE139_RS10405 | Not Available | Positive | 2281703 - 2283139 | 50213.4 |
| adp-forming succinate--coa ligase subunit beta | CE139_RS10410 | Not Available | Positive | 2283347 - 2284513 | 41687.2 |
| succinate--coa ligase subunit alpha | CE139_RS10415 | Not Available | Positive | 2284513 - 2285400 | 30297.8 |
| branched-chain amino acid transport system ii carrier protein | CE139_RS10420 | Not Available | Positive | 2285606 - 2286949 | 46219.6 |
| hypothetical protein | CE139_RS10425 | Not Available | Negative | 2287004 - 2287285 | 9615.05 |
| molecular chaperone htpg | CE139_RS10430 | Not Available | Positive | 2287486 - 2289390 | 71529.6 |
| dienelactone hydrolase family protein | CE139_RS10435 | Not Available | Positive | 2289446 - 2290183 | 26062.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





