Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate synthase | CE139_RS10340 | Not Available | Positive | 2265885 - 2268254 | 86169.0 |
| zinc transporter zntb | CE139_RS10345 | Not Available | Positive | 2268407 - 2269408 | 37393.9 |
| crfx protein | CE139_RS10350 | Not Available | Positive | 2269457 - 2269720 | 9559.46 |
| mechanosensitive ion channel family protein | CE139_RS10355 | Not Available | Positive | 2269721 - 2270545 | 28857.3 |
| rna polymerase sigma factor sigx | CE139_RS10360 | Not Available | Positive | 2270601 - 2271185 | 22899.6 |
| ompa family protein | CE139_RS10365 | Not Available | Positive | 2271286 - 2272341 | 37351.1 |
| citrate synthase | CE139_RS10370 | Not Available | Negative | 2272477 - 2273757 | 47362.3 |
| succinate dehydrogenase, cytochrome b556 subunit | CE139_RS10375 | Not Available | Positive | 2274105 - 2274491 | 13753.6 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | CE139_RS10380 | Not Available | Positive | 2274485 - 2274853 | 13798.2 |
| succinate dehydrogenase flavoprotein subunit | CE139_RS10385 | Not Available | Positive | 2274857 - 2276629 | 63723.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





