Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1090 domain-containing protein | CE139_RS10290 | Not Available | Positive | 2255414 - 2255794 | 13766.6 |
| histidine phosphatase family protein | CE139_RS10295 | Not Available | Negative | 2255801 - 2256367 | 21441.1 |
| fecr domain-containing protein | CE139_RS10300 | Not Available | Positive | 2256635 - 2257084 | 15664.0 |
| ompa family protein | CE139_RS10305 | Not Available | Positive | 2257081 - 2257713 | 22307.0 |
| chase2 domain-containing protein | CE139_RS10310 | Not Available | Positive | 2257724 - 2259721 | 72117.5 |
| tonb-dependent siderophore receptor | CE139_RS10315 | Not Available | Positive | 2260115 - 2262517 | 86817.6 |
| gnat family n-acetyltransferase | CE139_RS10320 | Not Available | Positive | 2262602 - 2263102 | 18531.2 |
| hypothetical protein | CE139_RS10325 | Not Available | Positive | 2263205 - 2264260 | 38144.5 |
| lyse family translocator | CE139_RS10330 | Not Available | Negative | 2264262 - 2264891 | 22491.9 |
| pyruvate, water dikinase regulatory protein | CE139_RS10335 | Not Available | Negative | 2264940 - 2265758 | 30870.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





